{ "_id": "6a23e3f3530b9bc726be8594", "Package": "biblioverlap", "Type": "Package", "Title": "Document-Level Matching Between Bibliographic Datasets", "Version": "1.0.3.9000", "Authors@R": "c(\nperson(\"Gabriel\", \"Vieira\", , \"gabriel.vieira@bioqmed.ufrj.br\", role = c(\"aut\", \"cre\", \"cph\"),\ncomment = c(ORCID = \"0000-0002-5529-7628\")),\nperson(\"Jacqueline\", \"Leta\", , \"jleta@bioqmed.ufrj.br\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0002-3271-7749\"))\n)", "Description": "Identifies and visualizes document overlap in any number\nof bibliographic datasets. This package implements the\nidentification of overlapping documents through the exact match\nof a unique identifier (e.g. Digital Object Identifier - DOI)\nand, for records where the identifier is absent, through a\nscore calculated from a set of fields commonly found in\nbibliographic datasets (Title, Source, Authors and Publication\nYear). Additionally, it provides functions to visualize the\nresults of the document matching through a Venn diagram and/or\nUpSet plot, as well as a summary of the matching procedure.", "License": "GPL (>= 3)", "Encoding": "UTF-8", "LazyData": "true", "RoxygenNote": "7.2.3", "URL": "https://github.com/gavieira/biblioverlap", "BugReports": "https://github.com/gavieira/biblioverlap/issues", "Roxygen": "list(markdown = TRUE)", "Config/pak/sysreqs": "cmake make libpng-dev libuv1-dev zlib1g-dev", "Repository": "https://gavieira.r-universe.dev", "Date/Publication": "2024-01-20 17:25:15 UTC", "RemoteUrl": "https://github.com/gavieira/biblioverlap", "RemoteRef": "HEAD", "RemoteSha": "adc31349ca93e3086be0235a650e9e5a6346512a", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-06 09:06:17 UTC", "User": "root" }, "Author": "Gabriel Vieira [aut, cre, cph] (ORCID:\n),\nJacqueline Leta [ctb] (ORCID: )", "Maintainer": "Gabriel Vieira ", "MD5sum": "4a0e536e47000748bc3885e031db67f7", "_user": "gavieira", "_type": "src", "_file": "biblioverlap_1.0.3.9000.tar.gz", "_fileid": "27c247c3f8d38aec1eab79e732ec52ff15f5c968de422c15cf4ea6b0fa117ea4", "_filesize": 596209, "_sha256": "27c247c3f8d38aec1eab79e732ec52ff15f5c968de422c15cf4ea6b0fa117ea4", "_created": "2026-06-06T09:06:17.000Z", "_published": "2026-06-06T09:10:11.208Z", "_distro": "noble", "_jobs": [ { "job": 79866384602, "time": 198, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7453126507" }, { "job": 79866384601, "time": 140, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7453119502" }, { "job": 79866384599, "time": 153, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7453117942" }, { "job": 79866384598, "time": 145, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7453116425" }, { "job": 79866203430, "time": 187, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7453102929" }, { "job": 79866384597, "time": 121, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7453117164" }, { "job": 79866384600, "time": 93, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7453113869" }, { "job": 79866384596, "time": 81, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7453112406" }, { "job": 79866384595, "time": 83, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7453112790" } ], "_buildurl": "https://github.com/r-universe/gavieira/actions/runs/27058148645", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/gavieira/biblioverlap", "_commit": { "id": "adc31349ca93e3086be0235a650e9e5a6346512a", "author": "gavieira ", "committer": "gavieira ", "message": "Added 'get_all_subset_matches()' function to the package\n", "time": 1705771515 }, "_maintainer": { "name": "Gabriel Vieira", "email": "gabriel.vieira@bioqmed.ufrj.br", "login": "gavieira", "description": "Post-doc working at @GID-UFRJ ", "uuid": 30009014, "orcid": "0000-0002-5529-7628" }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1", "role": "Depends" }, { "package": "cowplot", "role": "Imports" }, { "package": "dplyr", "role": "Imports" }, { "package": "ggplot2", "role": "Imports" }, { "package": "ggVennDiagram", "role": "Imports" }, { "package": "grDevices", "role": "Imports" }, { "package": "grid", "role": "Imports" }, { "package": "magrittr", "role": "Imports" }, { "package": "Matrix", "role": "Imports" }, { "package": "parallel", "role": "Imports" }, { "package": "png", "role": "Imports" }, { "package": "rlang", "role": "Imports" }, { "package": "shiny", "role": "Imports" }, { "package": "stringdist", "role": "Imports" }, { "package": "UpSetR", "role": "Imports" }, { "package": "uuid", "role": "Imports" }, { "package": "DT", "role": "Suggests" }, { "package": "testthat", "role": "Suggests" } ], "_owner": "gavieira", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_topics": [ "bibliometrics", "document-matching", "scientometrics", "upsetplot", "venn-diagram" ], "_stars": 7, "_contributors": [ { "user": "gavieira", "count": 115, "uuid": 30009014 } ], "_userbio": { "uuid": 30009014, "type": "user", "name": "Gabriel Alves Vieira", "description": "Post-doc working at @GID-UFRJ " }, "_downloads": { "count": 200, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/biblioverlap" }, "_devurl": "https://github.com/gavieira/biblioverlap", "_searchresults": 16, "_rbuild": "4.6.0", "_assets": [ "extra/biblioverlap.html", "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_homeurl": "https://github.com/gavieira/biblioverlap", "_realowner": "gavieira", "_cranurl": true, "_releases": [ { "version": "1.0.2", "date": "2023-11-07" } ], "_exports": [ "%>%", "biblioverApp", "biblioverlap", "get_all_subset_matches", "matching_summary_plot", "merge_input_files", "merge_results", "upset_plot", "venn_plot" ], "_datasets": [ { "name": "ufrj_bio_0122", "title": "UFRJ-affiliated documents from biological sciences disciplines (January 2022)", "object": "ufrj_bio_0122", "class": [ "list" ], "fields": [], "table": true, "tojson": true } ], "_help": [ { "page": "biblioverApp", "title": "Shiny App for the biblioverlap package", "topics": [ "biblioverApp" ] }, { "page": "biblioverlap", "title": "Document-level matching of bibliographic datasets", "topics": [ "biblioverlap" ] }, { "page": "get_all_subset_matches", "title": "Get all matches from a given subset of biblioverlap's results", "topics": [ "get_all_subset_matches" ] }, { "page": "matching_summary_plot", "title": "Plotting biblioverlap's matching summary", "topics": [ "matching_summary_plot" ] }, { "page": "merge_input_files", "title": "Merge multiple input files from the same source", "topics": [ "merge_input_files" ] }, { "page": "merge_results", "title": "Merge biblioverlap's results into a single dataframe", "topics": [ "merge_results" ] }, { "page": "ufrj_bio_0122", "title": "UFRJ-affiliated documents from biological sciences disciplines (January 2022)", "topics": [ "ufrj_bio_0122" ] }, { "page": "upset_plot", "title": "Plotting UpSet plot from biblioverlap results", "topics": [ "upset_plot" ] }, { "page": "venn_plot", "title": "Plotting Venn Diagram from biblioverlap results", "topics": [ "venn_plot" ] } ], "_readme": "https://github.com/gavieira/biblioverlap/raw/HEAD/README.md", "_rundeps": [ "admisc", "aplot", "base64enc", "bslib", "cachem", "cli", "commonmark", "cowplot", "cpp11", "digest", "dplyr", "farver", "fastmap", "fontawesome", "forcats", "fs", "generics", "ggfun", "ggplot2", "ggplotify", "ggVennDiagram", "glue", "gridExtra", "gridGraphics", "gtable", "htmltools", "httpuv", "isoband", "jquerylib", "jsonlite", "labeling", "later", "lattice", "lifecycle", "magrittr", "Matrix", "memoise", "mime", "otel", "patchwork", "pillar", "pkgconfig", "plyr", "png", "promises", "R6", "rappdirs", "RColorBrewer", "Rcpp", "rlang", "S7", "sass", "scales", "shiny", "sourcetools", "stringdist", "tibble", "tidyselect", "UpSetR", "utf8", "uuid", "vctrs", "venn", "viridisLite", "withr", "xtable", "yulab.utils" ], "_score": 3.7481880270062007, "_indexed": true, "_nocasepkg": "biblioverlap", "_universes": [ "gavieira" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.0.3.9000", "date": "2026-06-06T09:09:28.000Z", "distro": "noble", "commit": "adc31349ca93e3086be0235a650e9e5a6346512a", "fileid": "3aae6d218ff498686cfe6a2f08b1d9a6906f72f2caac37d066f33476d2ad4454", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/gavieira/actions/runs/27058148645" }, { "r": "4.6.0", "os": "linux", "version": "1.0.3.9000", "date": "2026-06-06T09:08:31.000Z", "distro": "noble", "commit": "adc31349ca93e3086be0235a650e9e5a6346512a", "fileid": "b8e2cd61f758aa9de8e0b9e09b50a88d206bac10de1fb659c661b6af4a2f44d0", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/gavieira/actions/runs/27058148645" }, { "r": "4.5.3", "os": "mac", "version": "1.0.3.9000", "date": "2026-06-06T09:08:23.000Z", "commit": "adc31349ca93e3086be0235a650e9e5a6346512a", "fileid": "92ecaf67c26229c53eb9cd518973c7f4b8394d639c924076ed4c24c4f744c807", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/gavieira/actions/runs/27058148645" }, { "r": "4.6.0", "os": "mac", "version": "1.0.3.9000", "date": "2026-06-06T09:08:09.000Z", "commit": "adc31349ca93e3086be0235a650e9e5a6346512a", "fileid": "65aec01e44a10d6975c63ff167a6af8d4068190ad2d70d87a08bd307b6384c80", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/gavieira/actions/runs/27058148645" }, { "r": "4.6.0", "os": "wasm", "version": "1.0.3.9000", "date": "2026-06-06T09:08:33.000Z", "commit": "adc31349ca93e3086be0235a650e9e5a6346512a", "fileid": "89e6ff33c55e5bbae2af7f081288d1ea81d78ad9038238bbe6e0dae79276558a", "status": "success", "buildurl": "https://github.com/r-universe/gavieira/actions/runs/27058148645" }, { "r": "4.7.0", "os": "win", "version": "1.0.3.9000", "date": "2026-06-06T09:07:35.000Z", "commit": "adc31349ca93e3086be0235a650e9e5a6346512a", "fileid": "dfb51d203fcb1dd2cb7f2fd0ab8f67a329c1f0049959545765ea1376667c53aa", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/gavieira/actions/runs/27058148645" }, { "r": "4.5.3", "os": "win", "version": "1.0.3.9000", "date": "2026-06-06T09:07:26.000Z", "commit": "adc31349ca93e3086be0235a650e9e5a6346512a", "fileid": "48c75c96b0a763a66f853fc905ccb106e4c7729a3f329a7745ecc521e73e3062", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/gavieira/actions/runs/27058148645" }, { "r": "4.6.0", "os": "win", "version": "1.0.3.9000", "date": "2026-06-06T09:07:30.000Z", "commit": "adc31349ca93e3086be0235a650e9e5a6346512a", "fileid": "cb75a51f28c454d558b7209516eac8465136d42b78f2d141e1b932035f9bdbde", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/gavieira/actions/runs/27058148645" } ] }